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Across all broadcast coverage sampled (including studio interviews), the average speaking time for politicians was 61 seconds.
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However, these figures were obtained using different sequencing coverage, sampling different anatomical sites and analyzing samples pooled from different number of individuals.
Low coverage samples (<0.05×) and low tumor fraction samples were manually reviewed for tumor fraction estimation.
Sampling designs compared are simple random sampling, spatial coverage sampling, and universal kriging model-based sampling.
This chapter describes a simple method for selecting such spatial coverage samples.
Spatial coverage sampling designs may also be created by clustering the spatial locations of a raster.
The AKV values for the spatial coverage samples and the geostatistical samples obtained with AKV as a minimisation criterion were comparable.
We developed a new R package for designing spatial coverage samples for mapping, and for random sampling from compact geographical strata for estimating spatial means.
One potential pitfall to identifying SNPs from low coverage samples is mistaking sequencing errors for true variants.
There were two outlier samples that displayed high amounts of amplifiable template as measured by the FTH1 assay but resulted in low coverage (samples Ca23 and Ca156).
These were used to create a reference of high confidence variant sites for subsequent SNP detection in the lower coverage samples.
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