Sentence examples for counts dataset from inspiring English sources
In the filesystem analogy, the Counts dataset of e.g. chromosome chr7 of cohort ExampleCohort will be stored at location / ExampleCohort/chr7/Counts in the HDF5 file (Supplementary Table S1 and Supplementary Fig. S1).
We tested the developed method using an incomplete leatherback nest count dataset (2002) on Ya:lima po nesting beach in French Guiana, and tested it using a complete nest count dataset from 1987.
To create a read-count dataset, we processed SAM files with python scripts described elsewhere (Anders and Huber 2010).
When applying the MH test to a spectral count dataset in proteomics (see Section 4.2), we obtained several unsatisfactory results.
Traditionally, spectral analysis has been used to describe periodic patterns, but the discontinuities in the daily nest count dataset makes the use of these tools inappropriate [ 35].
In the case of leatherback sea turtles nesting in French Guiana, we developed a mathematical model to explore the phenology of their nesting season, derived from an incomplete nest count dataset.
Finally, the presence/absence and count datasets were matched to the corresponding environmental data from each grid cell for each month from 2011 2016.
Kenya's long-term aerial count datasets show that there has been a 50%to80%0% decline in numbers of the vast majority of wildlife species since counts began in the mid-1970s (Ottichilo et al 2001; Homewood et al. 2001; Western et al. 2006 2009; Ogutu et al. 2011).
Indeed, methods adapted to count datasets are not numerous and are highly focused on the Poisson distribution.
We propose to extend its application with the use of the Pruned Dynamic Programming algorithm for count datasets such as outputs of sequencing experiments.
Briefly, normalisation factors calculated earlier were used to create DESeq count datasets for mRNA and pre-mRNA counts annotated with full experimental design (treatment × time) and dispersion values were calculated with default settings.
