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Such a graph is organized in layers that correspond to evolutionary stages, such as the seasons in which the viruses were isolated (Bokhari and Janies 2008).
Finally, we tested the hypothesis that the refined PB motifs correspond to evolutionary selected sequences by examining the co-evolution of virus pathogens.
It means that these origins correspond to evolutionary connected EFLs, but their similarity can only be detected with the help of the profile.
Among the increasingly numerous examples, the best known, reflected by the introduction of a new function, correspond to evolutionary novelties with a great impact.
Although our data confirm the assignment of these regions to GGA16, the issue as to whether these fragments showing sequence similarities really correspond to evolutionary orthologous fragments remains unresolved.
In S. cerevisiae, it has been previously reported that replication origins tend to colocalize with synteny breakpoints, suggesting that replication origins could correspond to evolutionary chromosomal fragile sites (Di Rienzi et al. 2009; Gordon et al. 2009).
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This was also supported by decreasing mean protein sequence identity between pairs of sequences corresponding to one-to-one, one-to-many, and many-to-many events suggesting these events corresponded to evolutionary time (Fig. 5, P < 2.2e-16 for all comparisons, Mann–Whitney U test).
The conservation score corresponds to evolutionary rate of that position.
Whether this is reminiscent of ancestral attributes or corresponds to evolutionary changes that led to selective advantages remains to be investigated.
m equals 2, 3, or 4 corresponds to evolutionary scenarios with positive selection of different strengths on indel substitutions on foreground branches.
The finite-time transition matrix is given by (2) P = exp [ t (r ) Q ], where t corresponds to evolutionary time, in arbitrary units.
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