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IsoRank [ 41] is another multiple network alignment method that aims to correspond nodes and edges of input networks to maximize the global "match" between PPI networks.
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This results in statistically significant networks, wherein stocks correspond to nodes and edges correspond to non-vanishing correlation coefficients [7].
Logically, the database is viewed as a large graph where biological entities correspond to nodes and edges correspond to relations, as is depicted schematically in Figure 1.
For the Twitter data, we first compiled the contribution matrices C in and C out of N nodes to M modules, where the rows of in- and out-C correspond to nodes and the columns correspond to modules.
Matrix rows correspond to nodes and matrix columns correspond to branches.
In the graph-based grouping procedure we used, our elements correspond to nodes and the similarity score between two elements correspond to the edge weight between the two nodes.
In geodetic network design, the ground stations correspond to nodes, and the edges that connect two nodes are usually undirectional; thus, only pairs of stations are important.
Communication can be represented as a graph where sub-filters correspond to nodes and edges are defined arbitrarily (as an attribute).
For the directed and weighted citation network of science, in which journals correspond to nodes and citations to directed and weighted links, we treat the citations as independent events and resample the weight of each link from a Poisson distribution with the link weight in the original network as mean.
When constructing a graph it is necessary to determine how biological elements and relations between them correspond to nodes and edges.
In these small networks, the four cell types ('identical' promoter dataset) correspond to nodes, and similarity between two cell types (=0) is indicated by an edge.
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CEO of Professional Science Editing for Scientists @ prosciediting.com