Sentence examples for correctly align from inspiring English sources

Errors in the multiple alignments of orthologous species would also account for some of the discrepancy in accuracy, and the assumption that the multiple alignments correctly align orthologous positions is clearly overly optimistic.

We also investigated the impact of filtering around indels, as past analyses have found that positions directly adjacent to indels are difficult for aligners to correctly align and a major contributor to error (Meader et al. 2010; Alkan et al. 2011).

In such a situation, our alignment approach will correctly align to and to since, for pairwise alignment, our algorithm returns a chain of fragments with maximum total score.

This allows binding sites to relocate within the regulatory sequence, making it difficult for alignment algorithms to correctly align them.

In these cases, a simple aligner will often correctly align only the binding site core while misaligning the outer regions, or misalign the entire binding site.

A recent study explored a range of common commercial and open source alignment tools (including BWA), and it reported that all those aligners failed to correctly align large indels, in agreement with our findings [ 23].

On average, in the 10 25% sequence identity range, alignments are improved by 28 correctly aligned residues compared with alignments made using FUGUE's default substitution tables.

Finally, pairwise LCBs in the predicted alignment lacking any correctly aligned nucleotide pairs are False Positive (FP).

In this example, 9 residues are correctly aligned over a total alignment length of 10 residues.

Table 6 gives the number of correctly aligned residues across all the alignments in each sequence identity bracket.

In terms of correctly aligned RI pairs, our multi-view alignment reaches a 99.7% performance.