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Motion correction was incorporated into the reconstruction process based on MR-derived motion fields.
Furthermore, the attenuation correction was incorporated in the iterative reconstruction process, which in some reconstruction algorithms may cause problems since they require a new system matrix for each subject to be imaged.
Generally Markov models assume transitions from one health state to the next occur at the end of the cycle, however in reality this transition can occur at any point during the cycle, therefore a half-cycle correction was incorporated.
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If this correction is incorporated in the expectation-maximization (EM) algorithm, it will be called the constrained EM method (CEM).
Several unique correction procedures, such as multi-read correction, bias correction and effective length correction, are incorporated only in Cufflinks2 and Cuffdiff2 [ 33]. edgeR, DESeq2 and Cuffdiff2 calculate their p values by the generalized linear model (GLM) likelihood ratio test [ 32], GLM Wald test [ 31] and t-test [ 12], respectively.
These corrections are incorporated into the corresponding CALDB files.
Random and scatter corrections are incorporated into the iterative algorithm [60].
Random and scatter corrections are incorporated into the iterative algorithm, with scatter correction performed using a fully 3D approach that considers both the axial and trans-axial scatter components.
In the case of the mean of ratio estimator (Eqs. 5.1 and 5.2), the bias correction factor of Hartley and Ross (1954) was incorporated into the estimator.
For the pooled group, a correction term for the study centre was incorporated in the models.
Where the variances in the two groups being compared on the t-test were unequal, a correction to the degrees of freedom was incorporated which resulted in values that were not whole numbers.
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