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On the other hand, the genes contained in the majority of the databases compared to the union of the remaining genes, proved to be significantly enriched for many of what one could consider to be core metabolic processes (Additional file 2): nucleotide metabolism, carbohydrate metabolism, lipid metabolism, and generation of energy, among others.
The networks essentially capture the core metabolic processes, such as the metabolism of carbohydrates, nucleic acids, amino acids and lipids, in the three organisms.
We describe the co-expression network of three core metabolic processes in the genetic model plant Arabidopsis thaliana: fatty acid biosynthesis, starch metabolism and amino acid (leucine) catabolism.
The majority of these synologs occur in core metabolic processes.
Many of the core metabolic processes were well represented.
It is evident that the core metabolic processes are conserved in evolution.
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These studies point to ammonia detoxification as a core metabolic process during water stress.
This set of genes is significantly enriched for core metabolic GO processes (e.g., carbohydrate, cofactor, amino acid, and nucleic acid metabolism), generation of precursor metabolites, tRNA aminoacylation, and response to oxidative stress.
Senescence has its evolutionary origin in a core of metabolic processes concerned with building and rebuilding photosynthetic complexes.
Despite the observed lack of overlap, the GO enrichment analysis of the consensus and majority genes (Additional file 2) does provide us with evidence that there is a core of metabolic processes the databases agree on.
Appropriate formulation of calcium and magnesium concentrations are therefore important for core metabolic and photosynthetic processes in the microalgal cells and can influence growth performance.
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