In these cases, the percent divergence between a given Helitron copy (representative of a particular family) and its second-best hit (not with itself) were used as a proxy to estimate the relative timing of amplification (see supplementary table S4, Supplementary Material online).
Most yeast SET-domain genes are single-copy representatives of distinct subgroups.
To assess the cohesion of the three sampled members of the Aquificae phylum, we focused on the 527 phylogenetic profiles containing single-copy representatives of all three Aquificae genomes (AHS), examining presence and absence patterns for the Archaea (R), Epsilonproteobacteria (E), and Thermotogae (T).
If the geometric and material properties of the cells are considered constants so that the cell structure can be though to be built from translating and copying the representative cell.
A front-page article on Thursday about Saudi Arabia's efforts to improve its image in the United States referred incorrectly in some copies to Representative Hale Boggs of Louisiana, the father of Thomas Hale Boggs Jr., who founded a public relations company hired by Saudi Arabia.
An article on Sunday about a delay by the Agriculture Department in confirming the United States' second case of mad cow disease referred incorrectly in some copies to Representative Rosa L. DeLauro of Connecticut, who said connections to industry impede the department's policing.
Our aim was to examine V1R diversity among strepsirrhine primates, particularly within the mouse lemurs and other lemuriforms (see supplementary table S1, Supplementary Material online, for taxa and associated metadata), with special attention to the relative abundance of intact and pseudogene copies of representative V1R genes.
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Results were parsed into a table (Additional file 1: Table S1) where a representative sequence was selected to represent every single protein family, each P. aeruginosa isolate has a column indicating the protein family representatives copy numbers within each of the analyzed genomes.
The same analysis was done comparing the TE family representative sequences to the flax assembly, and a TE was considered as a representative copy of the TE family if it matched in 80% of its sequence to the query.
