Sentence examples for coordinates of copy from inspiring English sources

Since BAC aCGH microarray and the graCNV microarray (U133 Plus 2.0 GeneChip) have been annotated according to the human genome assembly version 35, coordinates of copy number segments were compared directly.

And the detailed information of each family in this superfamily can be retrieved by clicking the corresponding entry, including the classification information, references, nucleotide sequences, copy numbers and coordinates of each copy.

The chromosomal location of the most complete I copies was inferred from the scaffold coordinates of each copy, and the correspondence of scaffolds with D. mojavensis polytene chromosome maps was performed using information found in Flybase.org (http://flybase.org/maps/chromosomes/maps.html, last accessed July 4, 2014) and in Schaeffer et al. (2008).

Two Rover copies had been previously annotated by the Génolevures consortium in the K. lactis genome (Souciet et al. 2009), but the coordinates of the copy KLLA0F02610t on chromosome Klla0F had to be modified (updated version is available in http://gryc.inra.fr, last accessed December 19 , 2014 supplementary table S4, Supplementary Material online).

Similarly, biological elements can be defined in terms of the coordinates of known DNA copy number polymorphisms [ 14].

BlastN searches [42] were performed, with default parameters, using as query each one of the consensus-canonical sequences of each LTRr family, providing a list of coordinates of putative LTRr copies in the genome.

First three columns – genome coordinates of the identified copies.

When considering CONTRA results (Additional file 1: Table S1), it was observed that CONTRA predicts the coordinates of each exon with copy number alteration while all the other programs predict CNVs with one or multiple exons.

The distance is defined as: "start coordinate of the downstream copy" minus "end coordinate of the upstream copy".

A 3-D model of HDC-MM was constructed by copying the coordinates of the residues from the crystal structure of AAT-EC into the corresponding residues in HDC-MM.

The preliminary model of KH1 RNA complex was obtained by copying the coordinates of the RNA molecule from the KH3 RNA structure obtained by NMR (Braddock et al, 2002) and optimising the interactions with the protein by the steepest descent method, as implemented in HyperChem 7.1 (Hypercube Inc., Gainesville FL, USA).