Sentence examples for conversion of coordinates from inspiring English sources

However, this approach relied on the availability of tools for the conversion of coordinates between genome builds that may not be available for emerging genome sequences and therefore it may not be generally applicable.

LiftOver [ 31], a tool at UCSC for conversion of genome coordinates between assemblies either within a species or between species, was used to convert the genomic coordinates of all human CREs to mouse, rat and dog coordinates.

Further pre-processing included calculation of a digital terrain model (DTM) from the ground returns, removal of overlaps from the raw data, and conversion of height coordinates (zvalues) of the vegetation returns from absolute elevation into distance-to-ground using the DTM [15].

Thanks to P. Tarroso for helping with the conversion of geographic coordinates in coastline distances between sampling sites.

The conversion of genomic coordinates between different genome assemblies was done by liftover software tool (http://www.genome.ucsc.edu/).ucsc.edu/

UCSC's LiftOver utility allows the conversion of genome coordinates from one species to another, using whole genome alignments (nets and chains) generated by their BLASTZ analysis [ 58, 59].

Further pre-processing included calculation of a digital terrain model (DTM) from the ground returns, removal of overlaps from the raw data, and conversion of height coordinates (zvalues) of the vegetation returns from absolute elevation into distance-to-ground using the DTM [ 15].

The analysis is based on the UCSC LiftOver conversion of the coordinates of human blocks to nonhuman genomes using chain files of precomputed whole-genome BLASTZ alignments with a minMatch of 0.95 and other search parameters in default setting (http://genome.ucsc.edu/cgi-bin/hgLiftOver, last accessed May 20 , 2015.

This point overlies a visible crossover between the rostral rhinal vein and the midline suture on the mouse skull, allowing for the conversion of the MRI coordinates into surgical stereotactic coordinates.

During the ensemble conversion, the continuations of coordinates and velocities should be kept.

Data from the 1000 Genomes Project (1KG) phase I (2010 November release) were utilised using LiftOver University of California Santa Cruz Genome Browserr, http://genome.ucsc.edu/cgi-bin/hgLiftOver) for the conversion of 2010 November coordinates to hg18.