Sentence examples for contiguous alignments from inspiring English sources

For zebrafish, 8 genes were identified using the graphical view and contiguous alignments of transcripts, of which 2 are located in genbank (see Additional file 1 for accession numbers).

Genes missing from A. carolinensis annotations can be attributed to gaps in the Anocar2.0 assembly; misassembly in genome scaffolds would interrupt contiguous alignments of transcripts at contig sequence boundaries.

It impresses for many reasons, not the least of which is that the artist brings the ghoulish and decorative into contiguous alignment.

The gene encoding mini-RCP is engineered by contiguous alignment of nucleotide sequences coding for selected epitopes of chicken RCP separated by leucyl alanine residues.

Specifically, we identified two degenerate transposases: one truncated ORF (CP4_3451) with 59% identity to the Tn1546 transposase [32] and another two ORFs (CP4_3464 and CP4_3465) that, when joined, produce a contiguous alignment (85% identity) with a resolvase/recombinase.

We generated a presumptive locus assembly of ordered/oriented spretus contigs that maximizes contiguous alignment between the two species (Fig. 1).

Minimum requirements for annotation were a contiguous alignment of 300 bp, with 85% sequence similarity and a minimum e-value of 1 × 10−20.

The segment (35%) at the top of group F had a dense contiguous alignment spanning the initial 28% of Mt-2.

To get the best possible contiguous alignment, each raspberry unigene was compared to its best CDS match in each of the three genomes with SSearch [ 68], a software program that performs a rigorous Smith-Waterman alignment.

Contigs were assembled and oriented for each spretus BAC in order to maximize contiguous alignment with the musculus assembly; short contigs without unambiguous alignment to musculus were omitted from this "locus assembly".

We used these contiguous alignment regions as conserved regions, which occupy 44% (1,255,655,305/2,818,767,476 bases, excluding the Y chromosome and gaps between contigs) of the human genome, which is almost the same percent (roughly 40%) as that detected by the previous study [ 20] of the mouse genome using BlastZ.