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In particular, the effects of SBEIIa silencing were investigated in terms of amylose content, transcript accumulation and protein profile of the enzymes involved in starch biosynthesis.
We then characterized each set of these genes by diverse features, including gene size, protein size, exon number, GC content, transcript support, and chromosomal locations.
A total of 296 citrus-specific genes (CSGs) and 1039 orphan genes were identified, and characterized by sequence features, including gene size, protein size, exon number, GC content, transcript support and chromosome location.
In both studies, there was no effect of either local G/C content, transcript abundance, used as a proxy for gene expression, or timing of replication on the local mutation rate.
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Linear plots for Figure 2. RNA SPOTs has little bias in GC content and transcript length.
Carotenoid accumulation, VOC content and transcript levels of relevant carotenoid biosynthetic genes were studied at five stages of fruit development.
Values are presented as the mtDNA content or transcript abundance of P49 and P07 relative to WT. Student's t-test was performed to determine significance (p < 0.05).
These results might imply that the net SSR content in transcript regions of Phytophthora species could be variable, and again, not directly related to phylogenetic distance.
The CQN package was used to compute gene-specific correction factors, or offsets, and these offsets were provided to the glm functions of edgeR to correct for GC content and transcript length biases.
But if you tune in on its website, you can access bonus content and transcripts, too.
Second, altering MYB28's expression causes changes in aliphatic glucosinolate content and transcripts (Table 1, 4 and 5, Figure 5).
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