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In addition we have summarised where there is evidence in the UMD3.1 assembly of the TRAV/TRDV gene content of copies of a homology unit differing due to either varying proportions of the homology unit being duplicated in different replicative iterations or post-replication insertion/deletion (see Additional file 8).
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Testing for the genomic content of copy number variations (CNVs) may help elucidate the 22q11.2 deletion mechanism and the variable clinical expression of the syndrome including the high (25%) risk for schizophrenia.
Theoretically, allele frequencies from the unselected base population should be used to construct G [ 20], which could be estimated after using linear regression to predict gene content (number of copies of a particular allele in a genotype of an individual) of non-genotyped ancestors, based on the available information of genotypes and pedigree [ 22].
In the following sections, g ik refers to the gene frequency value for genotypes AA, Aa and aa, coded as 1, 1/2 and 0, respectively, of individual i at locus k where i = 1, n and k = 1, L. Gene frequency is half the gene content (number of copies of the reference allele A).
The GC content of TE copies and sliding windows along the genome (GSW) were calculated an in-house script that divided the genome into sliding windows and calculated the GC percentage (GC%) in each window.
In that respect, journal editors are like newspaper editors, who check the content of reporters' copy for facts and internal inconsistencies but generally not their notes.
For visualizing the content of low copy repeats in the ratio plots (Fig. 2a,b), each BAC clone was classified into one out of seven categories and colour-coded as described previously [ 2].
Web sites that use Navio's locker software have a little window that slides open across the page to show your transaction history and what rights you have with the content: the number of copies you can download and policies on sharing, burning and reselling content on personal blogs.
The following account, keeping mainly within the scope of civilization as it developed in western Europe and North America, considers the book as it appeared at different times in history, the characteristic content and survival of copies and texts, and the means of production and distribution.
Fig. 14 Impact of percentage of content copies Γ/N UE to hit rate in the UE level (( overline{d_{mathrm{UE}}}=4 )).
The contents of medium-copy (frequency 11 100) and high copy (frequency >100) clones are only 1.7% among the 7400 non-redundant clones.
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