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The transition matrix generated this way contained the probability of each nucleotide following a given dinucleotide or pentanucleotide, which were used to parameterize the second and fifth order models.
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Expected survival was derived from a life table that contained the probabilities of death or the central death rates for the general population in Malaysia, by single age, sex, and calendar year between 1993 and 2012.
An agent's probability matrix is an array of rows and columns for acts and states, respectively, with each cell formed by the intersection of an act's row and a state's column containing the probability of the state given that the agent is about to perform the act.
The vector p contains the probability of each type of mutation.
This matrix contains the probability of nucleotide i being paired to j.
Thus, the Metropolis–Hastings ratio for chain swaps contains the probability of proposing a particular elongation of the shorter chain.
These matrices contain the probability of progression or regression of the patient to the other health states and to the death stage.
The cells contain the probability of each outcome (e.g., "x out of 100 experience (…the outcome…)", either with or without a visual aid to depict x out of 100.
The intensity diffracted by a crystal built from interstratified layers may be written as where Tr is the trace of the matrix, is the matrix containing the structure factors, [ W] is the matrix containing the probability of occurrence from each layer type, and [ Q] contains the junction probabilities.
It can be shown that these relationship matrices are easily estimated from the gametic IBD matrix, a 2n × 2n matrix containing the probability of identity of descent between any of the two gametes of an individual with the gametes of the remaining individuals in the pedigree [ 25].
X q * or X c * was an N × K matrix (K = K * + (K * × (K * − 1 ) / 2 ) ) (K* being the number of parental inbreds, three in our case), with K* columns containing the expected number of allele k given the marker data for each individual i and K * × (K * − 1 ) / 2 columns containing the probability of individual i being a heterozygote at the QTL q (or cofactor c).
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CEO of Professional Science Editing for Scientists @ prosciediting.com