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The list downloaded from GeneSigDB contained manually curated genes associated with lung cancer OS (Core algorithm in Additional file 1).
In addition to the currently published repositories such as BLAD (14) and CARD (13), some previously reported β-lactamase databases contained manually curated and processed β-lactamase data.
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Stem (.stm) files also contain manually inputted information such as species and site identification.
However, the BonnTempo-Corpus does not contain manually corrected phone labels.
Known as CHEMDNER, this track publicly released a large corpus of documents containing manually annotated chemical named entities.
The dictionary of "Sponge compounds" contains manually curated 3,050 sponge compounds (including synonyms), compiled from the published literature.
13321_2017_223_MOESM3_ESM.zip Additional file 3. Contains two folders, one contains the predictions obtained from each algorithm in RXN format (Folder: algorithmicPredictions), the other contains manually curated atom mappings, (Folder:standardisedPredictions).
In addition to these resources containing manually curated sources of bioactivity, there is a growing number of AID-PMID references deposited directly by the authors of scientific publications uploading their research data into the PubChem BioAssay database.
The dataset contains manually verified relations between categories from the GO and the CL that have been extracted using pattern matching on category names [23].
Public databases offer classifications of protein structures [2], e.g. SCOP database, which contains manually inspected structures that are classified in a hierarchical manner [3].
Annotation and functional analysis were performed using Ingenuity Pathways Analysis (IPA) 7.1 software (Ingenuity® System; www.ingenuity.com), a commercial database containing manually annotated data for human protein-protein and functional interactions derived from the literature.
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CEO of Professional Science Editing for Scientists @ prosciediting.com