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However, when a subset of genes is analyzed, e.g. all the genes that are reported in a particular list, the P-value associated with the number of genes contained in this list will likely be highly significant according to how unlikely it is to obtain all the genes contained in a given list in a random draw from all genes present in the bipartite graph.
Finally mutations contained in this list were manually verified using Tablet Genome viewer [ 54] by looking up the mutation positions in the BAM files generated by gsMapper.
A total of 26 genes was selected, and 15 of the 25 genes identified by PAM were contained in this list.
Of the 44 interactions contained in this list, which were not yet present in RegulonDB 6.1, we identified ten interactions where we could also identify a functional relationship between the regulator and the target.
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The essence of this work is contained in the list of putative locus-locus interactions shown in Table S1.
In addition, 13 borderline chemicals are contained in the list, which are characterized by LRTP.
C) Genes potentially related to fibrosis may be contained in that list.
Second, we agreed with comments made by clinicians that the symptoms contained in the list should be predominantly tumour-related.
For all other instances of j, i' is then considered only if it is contained in the list.
"Persons who wish to criticize and comment on them cannot ascertain which sites are contained in the lists unless they circumvent," the ruling said.
Using the gene expression and pathway data contained in the lists described earlier, the data are graphed and visualized.
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