Sentence examples for contain alignment from inspiring English sources

Alignment data are stored in JSON (a lightweight data-interchange format used by JavaScript) formatted files, which contain alignment details including coordinate, sequence identity, name, e-value, etc.

Using the default parameters of the software SOAPInDel [ 43], primary short insertions or deletions up to 5 bp were extracted based on the mapped reads that meet the pair-end requirements and contain alignment gaps, with all gaps supported by at least three non-redundant paired-end reads.

These defects, observed by high resolution transmission electron microscopy (HRTEM), contain alignments of Ta5+ vacancies along a crystallographic direction [001].

We now seek a set C that is large enough to contain alignments consistent with τ' and yet small enough for integration and sampling to be computationally feasible.

This avoids the problem of A being inconsistent with τ' as long as C is large enough to contain alignments consistent with both τ and τ'.

Due to the low number of protein types (see Table 4), D1 and D2 might contain alignments of the same protein types.

A Reconstruct Project consists of a set of raw images and corresponding XML files, each of which contains alignment and contrast transformations together with contour annotations for that image.

However both sequences contained alignment gaps not acceptable to the NCBI database.

The genetic distance between isolates was computed using the p-distance and all positions containing alignment gaps were eliminated in the pairwise sequence comparisons.

Evolutionary distances were computed using the JTT matrix-based method with all positions containing alignment gaps and missing data eliminated in pair-wise sequence comparisons.

All positions containing alignment gaps were eliminated automatically.