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If the two menisci are in contact, the threshold radius can be expressed as: begin{aligned} left( {R_{{_{text{m}} }}^ right)^{2} left( {pi - alpha - 2theta } right) + R_{{_{text{m}} }}^ cos theta left( {pi + alpha - psi + 2cot frac{alpha }{2}} right) hfill quad quad -,left( {2cot frac{alpha }{2} + frac{pi + alpha - psi }{2} - tan frac{pi - alpha - psi }{2}} right) = 0. hfill end{aligned} (16).
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Since cutoff thresholds can be useful but overly sharp, we recommend investigating predicted contacts below the threshold used in this work, especially where there is independent biological knowledge to validate the predictions.
In the airlay process the contact threshold of the net is related to the post-processing step of thermobonding.
Better assessment of contact barriers and lowering the threshold for contact with CAPS among suicidal and self-harming youths are therefore important.
Contact angle above the threshold values leads to failure initiation near to the geometric center of the disk.
Investigating the impact of the other two parameters, the study of the contact threshold a reveals a robust tensile behavior whereas changes of the net stiffness α are very sensitive.
In agreement with the method followed for their derivation, the correction factors can only be used when the contact angle has a value superior to the threshold contact angle (see Fig. 1a).
The resulting contact counts were further refined by setting the contact distance threshold between the contact fragments to remove self-ligation, non-ligation and random breaks (Additional file 1: Table S1).
If the contact strength is below the threshold value, a node ceases to be a part of community.
We suggest that users of EVcomplex consider predicted contacts that lie below the threshold of 0.8 in the context of other biological knowledge, where available, or in comparison to other higher scoring contacts for the same complex.
The chosen contact threshold equals the average distance between two Cα carbons in backbone hydrogen bonds at 5.77±0.53 Å. Hydrogen bonds were identified from a given atomic record using the Hydrogen Bond Explorer computer program version 2.01 with default parameter settings [27].
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