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Semantic queries allow for the construction of lists of elements of interest based on the model ontology, therefore checking and validating both the experimental data and the model.
Recent developments by algebraic geometers have led to the construction of lists of invariants which have been demonstrated to be more accurate on small sequences, but were limited in that they could only be used for trees with small numbers of taxa.
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The illustrations are remarkable for their beauty and clarity: every detail is carefully recorded, and in addition to the illustrations of the pageantry, the manuscripts include detailed drawings of the necessary armor and of the construction of the lists.
This figure shows the computation of effective weights and construction of forwarder lists for the candidate tree in Figure 11 using Algorithm 2. The computed effective weights as well as the constructed forwarder lists are marked along with the root and the intermediate nodes in the tree.
Recent work by algebraic geometers has led to the construction of complete lists of invariants for certain models of evolution [ 9, 12, 13].
This has facilitated the construction of ranked lists of genes, the transcripts of which are frequently and dramatically over-represented in tumours compared to matched normal lung tissue (Heighway et al, 2002).
This finding, which was unique to gC, also survived the FDR multiple-testing correction at the more conservative 0.05 threshold and the application of more stringent replication criteria for the construction of gene lists.
Construction of the list of the test error patterns is investigated in "List selection" section.
The scatter list generation and the ML ordering accelerate the construction of the list and make the LSD more suitable for the parallel hardware implementation.
While there are many genes associated with LOAD, ten different loci (Table 1) meet all the criteria to be included in the "Top Results" list of the Alzheimer Research Forum or ALZGENE (accessed October 2011, for details about construction of the list see http://www.alzgene.org/) for associations with AD [ 63].
Genes that received the higher scores in the pre-selected lists, and those that were pointed by the two different analyses were preferred, allowing the construction of a list of 17 candidates (displayed in the Table 2).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com