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We constructed truth tables and proceeded to simplify the truth tables through Boolean minimization (Table 2).
In addition, these constructed "truth" samples often contain large target gene variances that may not represent the subtle changes examined in certain experimental settings.
Therefore, the constructed truth value of the study depends on how rigorously and effectively the researcher's subjective experience of the phenomenon is explicated and recognised as a contributor to the phenomenon [ 36].
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In the 1933 original Polish version of his monograph Tarski says that his method for constructing truth predicates cannot be applied to the construction of a truth predicate for LGTC.
What is important to him, he says, is "how we construct truth", adding that "the book may very well have been called 'The Impossibility of Biography' .Poor Shakespeare.
He continues, "What psychoanalysis does is construct truths in the service of self-coherence".
We computed an adjusted Rand index [23] to evaluate the combined-clustering method described in Section 1 against the constructed ground truth datasets using an optimized cut height which was determined from the training datasets.
For disease annotation, we constructed a truth table of the Homayouni gene collection [ 20] manually using GeneRIF and OMIM text as a source.
A feasible way of reducing variability issue of ground truth is to construct ground truth with participation of several experts [ 51].
We call our constructs truth when they are nothing more than filters we choose to wear.
Synthetic data with constructed ground-truth may be used to assess the accuracy of a clustering or cluster number estimation algorithm.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com