Sentence examples for construct alignment from inspiring English sources

We hypothesized that in vitro construct alignment and stiffness might be enhanced in the midregion of the longer construct where the end effects of the posts on the bulk material (St. Venant effects) could be minimized.

Those existing alignment-graph-based methods differ in the strategies taken to construct alignment graph and to clustering the alignment graph.

A major advantage of this symmetry is that it is clear how to construct alignment models on an unrooted tree and leads to greater simplicity in model implementation and, arguably, decreased computation time.

We then construct alignments of evolved sequences using each aligner with default parameters, and quantify sensitivity and positive predictive value, (PPV) for nucleotide pair and indel predictions.

In practice, Gotoh did not use consistency to construct alignments, but rather to evaluate them, and only considering three sequences.

All of the above mentioned alignment methods are fully automated, i.e., they construct alignments following a fixed set of algorithmical rules.

The difference is that the former uses MCL after constructing alignment graph while the latter uses it before aligning with the other PPI network.

The constructed alignment in Phylip format was used to calculate the Neighbor-Joining tree, as described above.

We extracted a conserved core Rab motif from the constructed alignment, partitioned it into sub-alignments according to the different initial sequence groups and constructed an HMM for each one.

The final alignment graph of the core housekeeping genes is available for download as Additional file 3. Figure 3 shows the largest connected component of this constructed alignment graph.

To compare evolutionary divergence of PK genes with overall trends for other genes, we constructed alignments for control group of 7,711 well annotated orthologous human and mouse non-PK genes.