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Remember this is what Carl Woese used to relate different microbes to each other and construct a tree of life.
"The highly successful Deep Green project to construct a "tree of life" for the green plants has ended, but it has seeded new projects to strengthen the branches and root the tree more firmly in new genetic and fossil data.
The team used this data to construct a tree of the bacterial relationships among the primates.
In order to demonstrate the feasibility of this strategy, we have sought to construct a tree of life by considering the information contained within gene relationships at the genome level, as opposed to examining primary sequence identity.
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Furthermore, neighbor-joining on the unique SOM-expression profiles constructed a tree of the samples that recapitulated the hematopoietic tree (Fig. 2d and Supplementary Fig. 2d).
Students in this treatment constructed a tree of six major groups of chordates using a table of morphological characters (Additional file 1: Supplement 1).
Using these differences, the group constructed a tree of the 21 cases to predict how long ago the virus may have appeared in humans, how much it has changed since then, and how it has spread geographically.
MST constructs a tree of minimum total length between specified nodes, where the tree is defined as a graph G with one and only one path between every two nodes.
Therefore, we constructed a tree of the archaeal amoA gene sequences retrieved from the sponges from both sites (Fig. 5).
Kaoru et al. [ 16] successfully constructed a tree of life based on protein domain organization.
To probe the finer structure and to identify key elements in each of the computed endophenotypes, we constructed a tree of gene clusters for each endophenotype based on correlations between gene profiles.
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