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A Jaccard similarity matrix was generated and used to construct a principal coordinate plot deciphering the genetic relationships among the accessions.
The software Genetix [ 81] was used to construct a principal component analysis (PCA) to visualise the genetic distance between genotypes using each locus as an independent binary variable according to She et al[ 82].
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Furthermore, we constructed a principal coordinate analysis (PCA; [31]) graph in GenAlEx to visualize a covariance matrix with data standardization derived from the pairwise FST values to more effectively view the patterns of genetic distance among populations.
To visualize the pattern of expression differentiation, we constructed a principal coordinates analysis (PCoA) using the program package NTSYS-pc 2.02h [ 58].
Before combining them, in order to ensure that all these four aspects can form a single latent construct, a categorical principal component analysis (CATPCA) was conducted.
29 To construct a wealth index, principal component analysis (PCA) was carried out using 15 socio-economic variables (see Supplemental file for the details).
To provide conceptual clarity and evaluate construct validity, a principal component factor analysis with varimax rotation was conducted on 16 items related to motivational attitude.
This is despite repeated assurances by government that enabling new storage to be constructed was a principal aim of the capacity auction.
For this reason, our main specifications rely on peer quality indices constructed through a principal component analysis of multiple potential measures of peer quality.
Here, envelopes of postures are constructed using a principal component analysis (PCA) to find the skeleton's principal axis and orientation at each instant in time.
21 22 The SES index was constructed using a principal components analysis with polychoric correlation matrices.
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