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Namely, RAF uses a single-sequence RNA secondary structure prediction program CONTRAfold; Do et al., 2006b) and a pairwise RNA sequence alignment program (CONTRAlign; Do et al., 2006a), respectively, to construct a constraint set 𝒞 of allowed base pairs and aligned positions in a and b.
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Statistical support for alternative hypotheses was determined by constructing a constraint trees for each alternate hypothesis and using the constraints to filter trees from each analysis (100 bootstrap trees from maximum-likelihood, 1000 trees from neighbor-joining analysis, and 320,000 trees from Bayes) in Paup* [120].
Step 7: It recognizes all these constraints along with the initial constraints to construct a single constraint matrix.
To determine critical design dimensions, we propose a novel and efficient dimensionality reduction (DR) model that adapts Gaussian process regression (GPR) to construct a topological constraint between the design latent variables (LVs) and the regression space.
When C is equal to one, we can fall back to using the built-in min construct in a constraint (e.g., M #= min(L1, min(L2, L3))).
The toolbox automatically constructs a convex constraint satisfaction problem that incorporates all available data and the model equations.
Principle of the sequential strategy is to construct an equivalent deterministic constraint instead of the original probabilistic one, which is realized by using the locally exponential approximation.
Our design objective is to construct a codebook that satisfies two constraints: (1) construction of a transmit null at AOC ϕ ̂ and (2) orthogonal beamforming.
We can use gas flow models in (1) and (2) to construct a series of nodal balance constraints including all supplies, loads and nodal inflows and outflows, for the subsequent optimization problem.
It constructs an ImposedMotionSP constraint used to enforce the response of a degree-of-freedom at a node in the model.
In order to implement the K-H test, a model tree was built by first constructing a constraint tree reflecting pure raw material groups (i.e. taxonomic units of identical raw material were linked together in a multifircating clade).
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