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For the analysis of the PMEN2 clade, the topology of the phylogeny was fixed as that of the relevant clade of the overall phylogeny, in order to maintain consistency with the prediction of recombinations.
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When analysing the migration of individually marked fish it was clear that the general patterns of the actual migration showed a remarkable consistency with the predictions from the calculated trade-off ratios (Fig. 3).
Moreover, transcriptomic data with good consistency with the model predictions were used to find inconsistencies within the model by comparing expression levels with simulations [ 17].
Here, we propose another simple accuracy measure based on the pairwise consistency of the prediction with the true haplotypes.
In consistency with our prediction, the microarray expression profiles of Cla4 demonstrate a peak at M/G1.
However, as noted above, with an 89.4% overlap, there is a high degree of consistency between the prediction of the previously-reported model and the current predictions.
The observational time series, GISS49 global-mean near-surface air temperature and ERSST48 for the AMV and IPO, are represented with dark (positive anomalies) and light (negative anomalies) grey vertical bars, where a 4-year running mean has been applied for consistency with the time averaging of the predictions.
The obtained results are in a good consistency with the in-house model predictions.
Then, the consistency of the predictions with microarray data was checked visually in MGcV.
Main Comments Evaluation and control of accuracy, specificity, sensitivity of gene target predictions and consistency of the predictions with previous studies are my major focuses in consideration of the work.
The analyses were based on two aging mechanisms proposed in previous studies and the predictions showed consistency with the previous teardown observations that the sulfate formed at the negative interface is more difficult to be converted back than anywhere else in the electrodes.
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