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Usually, one considers both orientations of the sequence or equivalently both PWM orientations.
We could always consider both orientations, but that would entail a lot of double handling of information, so instead we normalize or canonicalize k-mers.
To consider both orientations, aliquots from the same fractions of small and long RNA pools were sense labelled using the mirVana miRNA Labeling Kit (Ambion) and antisense labelled as described [ 41].
When considering both head and gaze orientation (FR), schoolgirls showed the highest percentage of reactivity (79% 90% - Table 4).
Blood pressure was assessed by considering the orientations of the last guideline on hypertension of the European Society of Cardiology [ 26].
Agilent technology of oligo-DNA microarray was chosen to design a specific microarray based on sequenced transcriptome, containing two probes with both orientations considering all annotated transcripts and unknown transcripts with Phred quality>30 and length>400 bp.
Knowledge of the structural details of a particular G-quadruplex is crucial for the rational design of FRET probes if one considers different orientations of both termini of an oligonucleotide.
Considering all curriculum orientations, students in pre- school teaching education scored significantly higher than all the other departments.
The EBRD's profitability is proof that considering democratic orientation in financing decisions is an effective strategy.
Experimental studies of each property considering fibre orientation and the applied experimental techniques are critically reviewed.
Thus, shape optimization considering crystal orientation is a significant challenge for future research, but this approach has considerable potential.
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