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Probes with q≤0.05 (Bonferroni corrected) were considered significantly changed.
For the data presented in the manuscript, genes were considered significantly changed in ICU patients, when a delta value corresponding to the number of false significant genes of 5% (q-value), and an average fold change of 2, was achieved.
Genes which have the adjusted p-values less than 0.05, the TNoM scores equal to 0, and a fold-change in expression greater than 2 (on original data scale) were considered significantly changed [25].
Genes with at least two-fold change with an associated FDR-corrected p-value≤0.05 were considered significantly changed in sr45-1 relatove to WT. Scanning electron microscopy was conducted as described [69].
These genes were considered significantly changed by FOS.
Genes with P < 0.05 after family wise error correction were considered significantly changed.
Similar(40)
Modification sites with p-values ≤ 0.05 were considered as significantly changed.
More precisely, the expression of a gene was considered significantly and reproducibly changed when satisfying both criteria.
Genes were considered significantly regulated when fold-change ≥1.5 and p-value ≤0.05.
Probesets that presented a P-value <0.01 were considered to be significantly changed by treatment.
Genes with altered expression ratios of ≥ 2-fold for at least one of the time points and having a p value of < 0.05 were considered to be significantly changed and were further analyzed using clustering methods.
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