The gradient data are not corrected further and we remove the duplicate gradient data that were introduced by considering an overlap of 10° between the mid and the polar areas.
We also provide a novel feature, not present in other methods, that considers an overlap when the binding event between the miRNA seed and the mRNA 3′-UTR occurs in the same genomic position.
Second, we use the Latent Bernoulli Mixture (LBM) model [ 1] to generate binary matrices (mixtures) by considering: (a ) Overlapping biclusters (overlapping rate =5%% (well separated), 15%% (fairly separated) and 25%% (poorly separated)).
Furthermore, we considered any overlap of an EST or annotated gene with one of our clones to signify that that clone derived from a previously identified transcript.
A bird vocalization that shared 100% of its mean frequency range with the mean frequency range of a Zammara signal was considered a "complete" overlap; less than 100% to near zero was categorized as "partial," and all others were categorized as "none".
Turkdogan found that 58%% of children with migraine reported TTH features and 68 % of children with episodic TTH had migraine-type features; however, he considered this an overlap between features of migraine and TTH and vice versa, rather than a syndrome combining migraine and TTH [10].
MCTD was originally described by Sharp et al. in 1972 and is classically considered as an overlap syndrome presenting with features of SLE, progressive systemic sclerosis, polymyositis, and rheumatoid arthritis.
There, we considered an occurrence, if it overlaps a decoy by at least 10% nucleotides.
In subsequent analyses we also considered a potentially larger overlap, when a probe set was statistically significant in one contrast and achieved a high fold change in the other (sets 2, 4, 7, and 9).
