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Of these highly conserved Plants positions, site 13 was also highly conserved in Fungi, while sites 10 and 12 were only moderately conserved in Animals and Fungi.
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This conserved plant-inducible promoter sequence motif has been suggested to be associated with the regulation of genes induced in planta and also in the XVM2 medium [33].
As expected, all of these miRNAs share putative target genes with their homologous miRNAs in other plant-species (data not shown), reinforcing the idea that conserved plant-miRNAs are involved in essentials biological processes.
These identified vvi-miRNAs belong to 41 conserved plant miRNA families.
In this study, we have identified additional Physcomitrella miRNAs belonging to 13 conserved plant miRNA families.
These sequences are consistent with loosely conserved plant polyadenylation signals[ 46].
PIPs are remarkably well conserved plant MIPs that can be further classified into PIP1s and PIP2s.
Our findings suggest that the 3R-MYB genes represent an ancient and evolutionarily conserved plant gene family.
Many conserved plant miRNAs have been previously identified, although relatively few have been well characterized [ 22, 29, 30].
The identification of the EUL family provides the first evidence for the occurrence in terrestrial plants of a highly conserved plant specific domain.
The identification of the EUL family provides evidence for the occurrence in terrestrial plants of a highly conserved plant specific carbohydrate-binding domain.
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