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Both Sureshijani's CVD-based Z tp * MBE (Eq. 8) and the proposed equivalent gas density MBE (Eq. 14) enforce species conservation (surface gas), rather than overall molar conservation, and thus predictions from these models must be consistent.
We submitted the models PFF0015c_3 and PFL2660w_5 to the web server ProFunc ([ 36] to gain insights into the possible role of RIF_As. ProFunc uses a series of methods based on the 3D-structure (fold matching, residue conservation, surface cleft analysis, and functional 3D templates) to help identify possible functions of a protein.
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Surface conservation and surface potential of the Ron kinase domain were illustrated.
Inspection of evolutionary conservation of surface residues in the PriL-CTD reveals that a majority of conserved residues are located in the region of the PriL-CTD that is homologous to the DNA photolyase (Figure 3A).
Because over most of the country the water table is deep or the groundwater has a high mineral content, the conservation of surface runoff is of primary importance.
Simulation results demonstrated that species material balance conservation of surface gas and stock tank oil pseudo-components can be violated by the BO PVT model, while still honoring overall material balance.
(A ) Superimposition of HMPV (wheat) and RSV (split pea, PDB ID 4C3B) zinc fingers, highlighting the conservation of surface residues.
One family of proteins, the Bet v 1 homologues, showed an unusual conservation of surface shapes across different plants.
Side chains showing significant conservation of surface property (a score of <0.3) are also mostly internal and are likely to contribute to the fold.
For example, the PMUT method [ 103] (Table 2) is based on neural networks calibrated using known mutations, integrating several sequence and structural parameters (multiple sequence alignments generated with PSI-BLAST and PHD scores for secondary structure, conservation and surface exposure).
For the analysis of conservation of surface features, the Consurf server was used[ 83], using five PSI-BLAST iterations, homologue detection from Uniprot, and a maximum of 100 homologues.
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