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Those HBs which did not contain at least one significantly conserved position (conservation level > 0) were discarded.
The conservation level (conserved/not conserved) and scan region (upstream/intronic) can be selected in advance.
And it has no bias of assembling "conserved sequence" to study conservation level.
Conserved residues are shaded by different intensities based on conservation level in the alignment.
To answer this, we compare the conservation level of CNSs that have been lost in mouse but conserved among human, marmoset, and chicken (see table 1).
Because the background conservation level is high, the hallmark of this region is the clustering of conserved GC bases, rather than conservation alone.
Conservation level for the 212-amino-acid protein ComA in Bacilli, confirmed this as the most conserved component of the QS-regulating cluster.
In this paper, we found that constitutive exons have higher conservation level in exon regions and lower conservation level in flanking intron regions compared to conditional exons.
The Hos2 has the third highest evolutionary conservation level among the fungal histone modification proteins [10].
The Elp3 has the highest evolutionary conservation level among the fungal histone modification proteins [10].
Such sampling had undoubtedly achieved very high conservation level of "alternative exons".
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