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A very recently published study took a fourth approach, analyzing phylogenetic conservation, in conjunction with motif searching and published microarray data to predict ACS locations [ 43].
Using evidence of phylogenetic conservation in conjunction with our population, genetic-based predictions of conservation should allow for discovery of LOF events in the genome.
Tools that can be used to visualize sequence conservation in conjunction with other sequence characteristics, such as functional classifications and nucleotide composition, are particularly popular [ 1- 3].
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A large number of the marine protected areas (MPAs) designated in Spain have been proposed by public authorities or conservation NGOs in conjunction with their own administrations and other social and economic stakeholders.
Detailed Computational Fluid Dynamics (CFD) simulations are carried out, by solving mass, momentum conservation equations in conjunction with a control equation, and a dynamical evolution equation for the structural motion.
Commonly, a multiple sequence alignment (MSA) from BLAST [ 84] or PSI-BLAST [ 127] is used to derive conservation scores, in conjunction with substitution matrices (e.g. Dayhoff [ 171], BLOSUM [ 172], or position-specific) [ 13, 14, 33, 38, 41], often in combination with information theoretic measures (generally based on Shannon entropy [ 173]) [ 18, 27, 33, 39].
The release was timed to the announcement by Secretary of State Hillary Rodham Clinton of a partnership to promote conservation and improved management in conjunction with corporations like Coca-Cola and Ford and nongovernmental organizations like the Nature Conservancy.
The museum will offer a series of guided tours to so-called green buildings in New York, which are environmentally friendly because of energy conservation, design and materials, in conjunction with the exhibition "Big and Green: Toward Sustainable Architecture in the 21st Century".
The domain of the original differential model is divided into several interrelated control volumes or zones where mass and energy conservation laws are applied in conjunction with the necessary boundary conditions.
Tandem repeats are also used in population studies (5), conservation biology (6) and in conjunction with multiple sequence alignments (7, 8).
In conjunction, sequence conservation within manually curated HMMs representing the alignment of conserved protein domain families: SUPERFAMILY [Gough et al., 2001] and Pfam [Sonnhammer et al., 1997], is interrogated.
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