Sentence examples for conservation expected from inspiring English sources

We use BLASTx due to the higher level of conservation expected at the protein level compared with nucleotides.

In contrast to the examples of increased levels of mitochondrial sequence divergence, there are several groups that consistently show an unusually low level of divergence, even in the context of the general conservation expected for plants (Figs. 1, 2, 3).

(shown are distance values together with standard errors (SE) estimated by the bootstrap method in MEGA4 [ 22]) To further address the level of conservation expected at these promoter regions, we examined PhyloP scores [ 15], which provide a measure of sequence constraint or accelerated change compared to a neutral background model.

More recently, the existing quail maps were integrated and aligned to the assembled chicken sequence [ 20], thereby confirming the high degree of synteny conservation expected because of the high level of chromosome homology observed between both species [ 21], and the relevance of quail models for trait analyses in poultry.

The absence of introns in the ESTs, a higher level of conservation expected at protein level and use of a different mining criterion, resulted in an increased proportion of reads (30.9%) having significant hits against the nr protein database (cut off E = e-5), though this only represents the similarity to known proteins in other organisms.

We found that many of these elements had significantly higher degree of sequence conservation than expected and that such high conservation was caused by ISNR.

Because miRNAs have been highly conserved in evolution, similar conservation is expected of their targets.

Indeed, mouse exons that could not be aligned to the rat genome were not considered at all, and thus some conservation is expected simply by definition: in a conserved region in DNA, chance activation of cryptic sites would create a seemingly conserved exon.

The strong conservation of coiled-coil regions is surprising: A certain level of sequence conservation is expected due to the coiled-coil constraint to preserve the heptad pattern, but this result suggests that a specific amino acid sequence is preserved beyond the pattern per se.

PhastCons parameters were tuned to produce 5% conserved elements in the genome for the vertebrate conservation measurement (expected length = 45, target coverage = 0.3, rho = 0.31).

For highly conserved genes such as the HOX family of genes, this degree of conservation is expected; HOXA4 coding region sequence identity is 97.4% (938/963 nucleotides) and protein sequence identity is 96.6% (309/320 amino acids) between humans and baboons.