Sentence examples for consensus calculation from inspiring English sources
The relationship between the number of trees per replicate fed into the consensus calculation and the BS/JS is still less straightforward.
The aforementioned consensus calculation is naturally extended to the phasing stage, where the phasing consensus is derived by concatenating the consensus of two alignment columns of interest.
Thus, the consensus calculation (MR) that changed sequences the least in terms of the average residue identity has changed the score distribution parameters the most.
For conservative interpretation of the molecular phylogeny, equally large samples of trees (exclusive of burnin) were extracted from the posterior distributions of analyses run under different parameter settings (i.e. previously explained partition settings) and subjected to majority rule consensus calculation.
The details about the conservation, quality, and consensus calculations of DSS1 protein alignments can be found in website (http://www.jalview.org/help.html).org/help.html
The partial consensus calculations resulted in average compositions that were much closer to the native ones (Fig. 3B).
For consensus tree calculation, trees were TBR-collapsed, Bremer group supports calculated by TBR-swapping, and bootstrap resampling by 100 replications of symmetric resampling with a single random addition (see Additional file 1).
This study deals with the problem of consensus error calculation for linear multi-agent systems (MASs) with system noises and measurement noises.
For rooted analyses the first 12 million generations with an SDSF of 0.0024 or greater were removed prior to consensus tree calculation.
These sequences were used for multiple alignment (ClustalW with default settings) and consensus sequence calculation.
In these cases, the "quick and dirty" approach is inadequate, because consensus sequence calculation is accurate only if these three sources of sequence diversity are distinguishable from the error due to background noise [ 9].
