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Connections were removed if the geodesic distance between parcel centroids was <30 mm.
All syringes and connections were removed from the device.
Spurious connections were removed by setting a threshold of at least 20 samples.
Connections were removed by setting the corresponding Tij values to 0, and networks were re-tested for the persistence of the designated attractor in the reduced configuration.
Particularly, we observed that the size of the largest connected network component was reduced to 20% when all inter-module connections (41/337; 12.17%) were attacked, whereas it remained nearly unchanged when the same proportion of intra-module connections were removed (Figure 9B).
We then considered a similar model to the latter, where forward connections were removed from A1 to STG (STG_nf).
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Subsequently, most of those connections are removed.
If one or more of the initial states failed to converge to the designated attractor at any step, the connections that had been removed at the previous step were reinstated and a different set of random connections was removed.
Here, neighbors have direct dependencies, since indirect gene connections are removed by this method.
Similarly we can calculate how many connections are removed when a protein is lost from the network.
More specifically, for each iteration of k, given the network from the previous iteration, genes with less than k connections are removed from the graph.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com