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The index does not try to map the totality of all details but rather serves as a connection map for the objects contained in other ontologies.
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As such, we built the regulatory block for each gene based on distal-DHS-promoter connection map (denoted as DHS-based regulatory block in this study).
For example, 1538 (of 3391) heart enhancers assigned to at least one heart gene could not be retrieved from this distal-DHS-promoter connection map.
If you lose connection, Google Maps for Android doesn't freak out, it simply settles into offline mode and keeps you going on the route you're on.
The experimental methods underlying both the anatomical and physiological connectivity maps provide connection probabilities for different cell types in different layers, but sample from different lateral spreads: The anatomical data correspond to a very large cortical surface area, parameterized by the sampling radius ra.
This is unlike other common approaches for building pathway or connectivity maps where connections are often represented without regard for tissue or disease contexts.
The Connectivity Map [39], [40] was a new tool for finding connections among small molecules sharing a mechanism of action, chemicals and physiological processes, and diseases and drugs.
Resting state connectivity was assessed by calculating the number of functional connections within the default mode map for each subject.
For display on fractional anisotropy maps, the connectivity map was thresholded to include only voxels with a connection probability >5%, representing a compromise between retaining anatomically valid tracts, and removing obviously artifactual connections.
It's also worth noting that unlike Google's own free Sat-Nav offering, Navmii's app doesn't require a persistent data connection since the maps for each country are pre-loaded on to the device.
More general details about ontologies used in proteomics, the use of CV terms in connection with mapping files for semantic validation and MIAPE compliance checking and the OBO format and related tools for working with OBO files are presented in an overview article by Mayer et al. (in preparation).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com