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The activities involve verification to establish maximum pattern swing conformity and conformation to swing time packet limits.
In reality, however, domain-peptide complexes exist in many different conformational states, dynamically moving from one conformation to another.
The test instance is classified by checking its conformation to each class of the network.
In the soluble state, AP1 adopts a similarly "closed" conformation to prevent cargo binding (Heldwein et al., 2004).
It does not mean anything like the pre-Darwinian ideas of "similarity" or conformation to an ideal type.
Upon binding to ARF1 on membrane, AP1 shifts into an "open" conformation to allow cargo binding (Ren et al., 2013).
The redox partner of P450cam stabilizes it in an open conformation to facilitate proton-coupled electron transfer.
Rev. E 71 (2005) 036707], which uses a fixed computational mesh without conformation to the geometry of the particles.
Moreover, CD results demonstrated that C2 complex induced alteration of HSA conformation to more significant extent compared to C1.
This network of interactions communicates changes in the P-loop conformation to distant parts of the helicase.
We next forced the backbone from the unbound toward the bound conformation to create a family of docking energy landscapes.
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