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Although quite straightforward, the bound is sufficient to confirm convergence of the algorithm, as we will see immediately.
Numerical results show the good performance of the method on uniform, skewed as well as composite meshes and confirm convergence at optimal rates.
Three independent runs of MrBayes, incorporating the above partitioned model were run to confirm convergence.
The models were run three times to confirm convergence of parameter estimates, and only the results of the run that yielded the highest Ln likelihood value are presented.
Logfile outputs were inspected in Tracer [ 45] software to confirm convergence.
The R package "coda" was used to confirm convergence and mixing of the MCMC.
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Some numerical examples are given, confirming convergence rates for the approximations.
Analysis with Tracer 1.4 [50] confirmed convergence among chains and adequate sample size.
All reported posteriors had an R-score below 1.05, and Geweke Z-scores also confirmed convergence.
We also confirmed convergence of the Gibbs sampler in each case (data not shown).
A burn-in period of 10,000 generations was adopted and analyses were run twice for confirming convergence.
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