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The proposed DE performs a database-independent approach which does not rely upon the minimum support and the minimum confidence thresholds which are hard to determine for each database.
The support and confidence thresholds are usually predefined by users.
In other simulations, we varied the size of confidence "bins," simulating noisy individual confidence thresholds.
We fixed the maximum support and confidence thresholds at 1 (as per tradition).
Most similar to IEM, we considered confidence thresholds based on entropy.
Table 6 Performance of the ensemble extractor on the CEM task at various confidence thresholds.
Similar(22)
For the confidence threshold, a higher value represents a more confident pattern.
Data were aligned using PyNAST and a 0.80 confidence threshold.
A confidence threshold of ⩽0.001 (P value) was used in all analyses.
The protein confidence threshold was a ProteinPilot unused score of 1.3 with at least one peptide showing 95% confidence.
Black contours show the time-average depth-integrated stream function and areas with correlations above 95% confidence threshold are dotted.
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