Cross-species similarity was examined between pure liver, liver invasion, tumor invasion and pure tumor compartments through overlap of up-regulated genes and gene ontology (GO -based bioloGO -basedmes on the level of single GO-terms and of condensed GO-term families.
GO terms were condensed to "most specific terms", i.e. less descriptive parent terms in the hierarchy were removed and only the most-descriptive child terms were retained.
These 2 datasets were condensed to 82,872 terms for 12,133 transcripts after accounting for redundancy between datasets.
A new term, the condensed bond enthalpy (CBE), is proposed to specify the energy contained in bonds between atoms in condensed states.
All of us hope to deliver the "big boost" session, but common challenges are 1) how to condense a half-term or full-term of material into 1.5 to 2 hours, and 2) how to provide effective preparation without teaching to the test, especially in the common situation of having seen the exam in advance.
The E. coli chromosome is condensed into insulated regions termed macrodomains (MDs), which are essential for genomic packaging.
This feature operates using a condensed list of GO terms predetermined to be relevant to BioModels.
Eukaryotic DNA is intimately associated with a family of small, basic histone proteins, to form a highly ordered and condensed protein : DNA complex termed chromatin.
To help provide an overview of the GO based on the BLAST results, the GO terms were condensed using the generic GO Slim subset.
Whatever the message, the contribution made by each signal — what he called, somewhat provocatively, its "information" — could be quantified in binary digits (i.e., 1s and 0s), a term that conveniently condensed to "bits".
One method is the implicit condensation method where the effects of membrane displacements are condensed into the nonlinear stiffness terms of the bending equations.
