Here, we apply different methods to identify concordance between network partitions across time for two animal trading networks, those of salmon in Scotland (2002 2004) and livestock in Great Britain (2003 2004).
Whether the observed level of concordance between the network predictions and the results of experimental VASH1 knockdown only surrounds the major hubs within the Bayesian network structure, or is randomly distributed throughout the network, requires further investigation.
The networks obtained from EMMA showed high concordance with the networks obtained from PCA-based population structure correction, with ∼75% of edges shared between the two networks (p value for significant overlap < 10−16).
Social network concordance in food choice among spouses, friends, and siblings.
In concordance with the network groups, FST values showed the species as three distinct populations, with H. heurippa showing greater differentiation from H. c. cordula (FST = 0.791) and H. m. melpomene (FST = 0.719) than that observed between H. c. cordula and H. m. melopomene (FST = 0.498 P < 0.05; Table 3; Figure 2A).
Wu et al. [ 5] develop a tool called CIPHER to predict disease genes based on a global concordance between a PPI network and a phenotype network.
The phylogenomic analyses (both concatenated tree and concordance tree) and phylogenetic network in current study indicated similar findings that Protocruzia has a strong impact on the monophyly of the class Spirotrichea, and it might be an early branch of the subphylum Intramacronucleata in the evolutionary line from the class Heterotrichea (subphylum Postciliodesmatophora).
Let-7a and mir-125a played important role in the t(4 14) regulatory network, in concordance with a previous study by Lionetti et al. [ 58].
Two authors carried out a methodological evaluation according to the Scottish Intercollegiate Guidelines Network items (concordance was analysed by weighted kappa index), and a systematic analysis of the potential biases of each study was assessed.
For each method compared, we applied Pearson's chi-square test to a 2 × 2 contingency table that quantified the concordance of the inferred network with the Yeastract database.
