Sentence examples for computing the composition from inspiring English sources

This assumption, coupled with the Richardson and Zaki formula, leads to a modified Richardson and Zaki formula for computing the composition of the mixed layer in a binary solid-liquid fluidized bed.

The subject data are filtered before compositionally adjusted scoring matrices are computed, and occurrences of the X character are ignored when computing the composition of a sequence.

Applying composition-based statistics when one of the sequences is a hypothetical amino acid sequence, however, presents a challenge not present when both sequences are proteins – it is not obvious which parts of the hypothetical sequence to use when computing the composition.

The effect of a compositional field is analyzed here, using an extension of the moving point source to compute the composition in the melt ahead of a twisting crystal.

The model computes the composition depth profiles of the alloy constituents in the alloy as well as the evolution in the phase fractions in the alloy as function of oxidation time.

Second, we compute the sequence compositions of DNA segments in H3 nucleosomes and in H3K4me3 nucleosomes separately, whereas Segal et al. computed the composition in extracted DNA segments in all forms of nucleosomes after treatment of micrococcal nuclease.

In this section, we outline the algorithm used to compute the composition of database sequences and to apply composition-based statistics in TBLASTN.

BLAST identifies windows that contain likely coding regions and then uses these windows to compute the composition of the hypothetical proteins.

To that aim, we compute the composition identity CIij for each pair (Fi, Fj) of N sub-families and consider that they are related if CIij > D. We then build all the subgroups of related sub-families and, among each subgroup, we eliminate the most common sequences in related families in order to decrease their composition identity to new acceptable CIij values.

We develop a simple algorithm for computing the OPRAm composition tables and prove its correctness.

This characteristic is based on the relationship between RNA codons and their translated amino acids, suggesting the possibility that an amino acid may mutate into another amino acid (Additional file 1: Table S3) [ 40, 41], and therefore computes the future composition of a type of amino acid according to its current composition in a protein and mutating probability.