Sentence examples similar to computing probe from inspiring English sources

(A) Computing probe-wise subgroup percentiles.

Quantile normalization was performed by computing probe-level quantiles from a 940-array (HGU133plus2) training set (Additional File 1) and applying these quantiles to additional HGU133A arrays as they were added to the dataset.

Resulting image files were processed by Affymetrix Microarray Suite 5.0 (MAS5) to compute probe set-specific expression values, e.g. Signal, Detection, etc. Three independent RNA extractions were performed for each cell lines (both for parental and for ñ° derivatives), reaching a total of 12 microarrays.

All microarrays were computed probe sets that summarized each of the eight species using Affymetrix Power Tools [ 26].

Contrary to these programs however, CADO4MI has the potential to compute probe sets for the same query genes using simultaneously two or more databases in order to select optimal sequences.

Computing the probe frequencies uses only the coding regions of a genome sequence.

However, computing the probing rates that result in a fair equilibrium distribution is non-trivial[9].

Initial expression values were computed from probe intensities using the program GenomeStudio (Illumina).

Following the quality metrics defined by Chen et al. [ 23] we computed three probe quality criteria: fluorescent intensity measurement, background flatness and signal intensity consistency qualities.

BAGEL analysis uses Bayesian algorithm to compute the probe signal ratios between samples and the reference strain, with P values indicating the significance (for more details, see Townsend and Hartl 2002; Lemos et al. 2008).

The Prismatic GUI provides an interactive way to compute individual probes with PRISM and multislice to tune the parameters before running a full calculation.