Sentence examples for computing of the likelihood from inspiring English sources
Although some Bayesian analyses have been more recently developed to do so [8, 9], many require complex and time-consuming computing of the likelihood functions, restraining the ability to explore more than often too simple evolutionary scenarios and molecular models [10].
The computational cost of obtaining posterior genotype probabilities for all members of a pedigree would approximately be equal to twice that of computing the likelihood because computing the likelihood only requires computing the anterior cutsets while computing all genotype probabilities would require computing the posterior cutsets also.
In addition, as predicted from complexity analysis, the runtime of computing probabilities at all loci is twice that of computing the likelihood of data.
The general idea of computing the likelihood conditionally on haplotype frequencies in the population and then taking the expected value was first proposed in [ 29], and was subsequently used in [ 10] and [ 8].
Factored HMMs offer computational benefits when computing the likelihood of data.
Compute the summation of the likelihood as S={displaystyle sum_{j=1}^N{lambda_t}^{(j)}} (4).
The FC applies (11), (12) and (13) to compute the values of the likelihood function with different θ.
Calculate the likelihood of the particle : λ t (i) (b) Compute the summation of the likelihood as S={displaystyle sum_{j=1}^N{lambda_t}^{(j)}} (4) (c) Sample N times with replacement from the set of particles x t (i) according to the following normalized importance likelihood {beta}^{(i)}=frac{{lambda_t}^{(i)}}{S} (5).
However, SNAP does consider the composition of each sequence element in computing the likelihood of particular gene models, and sequence changes within these elements may affect the likelihood of alternative gene models or states (e.g. no gene) enough to alter SNAP's predictions.
To accelerate the computing of maximum likelihood and bootstrapping, this work integrates MPICH2/PhyML, PalmMonitor and Palm job controller across several machines with multiple processors and adopts the task parallelism approach.
Finally, the main technical contribution of [ 22] is a DP algorithm for computing the likelihood of a gene-tree and its edge lengths given parameters and the species-tree under the DL model.
