Exact(4)
It offers methods for computing expression values from mapped reads and raw microarray data, background correction and normalization and linking microarray probes to genomic coordinates.
The Invariant Set Normalization method and the model based method were used for computing expression values [ 28].
Segal et al. designed a thermodynamic model for computing expression patterns where cis-regulatory sequences, binding-site preferences and expression of TFs were taken into account.
We compare the problem of estimating ν and τ values with that of computing expression in terms of reads per kilobase per million mapped reads (RPKM; Mortazavi et al., 2008).
Similar(56)
You mention the fact that you're epileptic to some people and they look at you like they're a robot you've just asked to explain the concept of love; they adopt a sort of "DOES NOT COMPUTE!" expression.
We first compute expression on the left of (2.5) for these cases: (i) and, (244).
The Parseval Theorem [32] is applied in order to compute expression (5), since it is possible to obtain an equivalent expression that makes use of the impulse response from signal to the output of the systems, instead of using.
Therefore, the network was fully characterized by the parameters, and by knowing the expression profiles of the first layer, it is possible to directly compute expression profiles of all of the remaining genes.
The R Bioconductor affy package rma function was used to compute expression.
Conventional cluster analysis of genes computes expression similarity across the full set of sample features.
TopHat (Trapnell et al. 2009) was used to compute expression levels of 18507 Augustus gene models.
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