Values near branches are SH-like local supports computed by the FastTree program and are used as confidence values of tree branches.
(b) Support weights computed by the original adaptive weight algorithm.
The total score for emotional support was computed by adding all four items, and ranges between 1 16.
We used MP-EST to produce the starting tree, and then ran five different iterations of DACTAL-boosting and SSG-boosting, using different subset sizes (from 15 to 22), and using different criteria (maximum pseudo-likelihood as computed by MP-EST or quartet support) to select the final tree.
AUC-ROC can be computed by linear interpolation between the supporting points of the curve for hard-labeled and soft-labeled data.
In addition to the interactive visualization of simulated flux data computed by FBA-SimVis, the software supports the visualization of any kind of flux data provided by external analysis.
Support values were computed by bootstrap analysis of 100 replicates, unless indicated otherwise.
A score for each social support scale was computed by averaging across items.
Tree support values were computed by approximate likelihood ratio test (aLTR) as implemented in PhyML [ 46, 97].
The index is computed by use of logic programming within a multi-criteria Decision Support System (DSS).
Bootstrap support values of the PhyML protein trees were computed by re-sampling 1000 times.
