We have developed a computational, composition-based, pipeline to scan almost 2000 plasmids for genes that differ significantly from their hosting molecule.
Using the prion-like amino-acid composition computational algorithm, we detected 2679 unique putative prion-like domains within 2,742,160 publicly available viral protein sequences.
2) The ultra-high resolution of the FTICR-MS enables mass measurements with accuracy sufficient for the computational determination of elemental composition, and rapid insight into the identities of peaks.
Often the additional step of manual review of sequencing analysis results is added to the workflow to detect false positive/negative calls due to particular sequence composition or computational pipeline artifacts.
Here we explain the plasticity observed in a Zr Cu(Ni Al BMG, based on a computational analysis of the composition-dependent internal structures that influence shear transformations and shear localization behavior under loading.
For the design of finite-field consensus networks, we propose a general design method, with high computational complexity, and a network composition rule to generate large consensus networks from smaller components.
The effect of CBZ on the soil microbial community was investigated using high throughput sequencing and a computational approach to predict functional composition of the metagenomes (phylogenetic investigation of communities by reconstruction of unobserved states, PICRUSt).
We present results from the application of a computational package Selection of Semiconductor Composition for Photoelectrochemical Solar Cells (SSCPECS) developed to assist in the selection of stoichiometric compounds of mixed materials and the best mixing ratio for narrowing the extent of further experimental investigations.
Therefore, computational inference of subclonal population composition from short-read data is an important challenge.
This analysis was performed using a Composition Profiler, a computational tool that automates this task and graphically summarizes the results [ 53].
MetaPhlAn (v1.7.3) is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data by running BLAST searches against unique clade-specific marker genes identified from 3,000 reference genomes [ 29].
