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Because they were not used in the computation of diversity measures, θ w may be 0.00 for a gene in Additional file 2, Table S1 but SNPs may exist in the A and B genomes of synthetics wheats in the database.
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DnaSP 4.10.3 software [30] was used for the computation of different diversity indices, including haplotype and nucleotide diversities and mean number of pairwise differences [31], [32], [33].
An exception is the computation of the genetic diversity indices, for which statistics were performed both with and without clonal copies.
In this case, a FORTRAN program that implements the computation of Weitzman's diversity was used, and with the ultra-metric distance matrix obtained, a hierarchical tree resulting from Weitzman's algorithm [ 25] was constructed with MEGA 5 [ 26].
Standard approaches for analyzing time-series data of the microbiota involve computation of measures of ecological community diversity at each time-point, or measures of dissimilarity between pairs of time-points.
After the recent publication of our article (Leroy, Genetics Selection Evolution 2009 41 5), we found several errors in the published Table Three, concerning the computation of contribution to within-breed diversity (CW).
Computation of ratios of silent and replacement sites was greatly affected by the low levels of diversity in the D genome and was of limited value (Additional file 1, Table S2).
The relative levels of diversity in the CR and other mitogenome regions were compared using the standard error computations calculated above to provide 95% confidence intervals (CIs).
The lack of diversity of the faculty.
Stages of Diversity Awareness.
A number of centers of diversity exist.
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