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Interestingly, we could not observe any correlation between the increased production of the terpenoid compounds and expression levels of the terpene synthase-encoding genes.
We looked at the wide variety of inducible defense mechanisms (e.g., oxidative burst, production of antimicrobial compounds and expression of defense-related genes [ 29, 30]) usually triggered upon microbe recognition.
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It should be noted that we predicted compound response from steady-state mRNA expression levels not only when inheritance of both compound response and expression levels is Mendelian, but also in cases when inheritance of both compound response and expression levels is genetically complex.
The abundance of cyanogenic compounds and higher expression of LuUGT85Q1 in stem, root and mature seed (i.e. 48 DAF) suggest the putative function as cyanogenic glycosyltransferases [ 20].
Furthermore, the emissions of floral volatile compounds and the expression patterns of genes involved in the floral scent formation were analyzed.
Increases in far-red (FR) radiation impact plant secondary metabolite accumulation [ 55], and can lead to an attenuated defense response resulting in increased levels of herbivory, fewer phenolic compounds and reduced expression of genes in the jamonate pathway [ 14, 56].
Volatile (52 compounds) and gene expression (4348 genes) levels were profiled in peach fruit from a maturity time-course series belonging to two peach genotypes that showed considerable differences in maturation characteristics and postharvest ripening.
Detailed molecular-level analyses allow us to decipher the relationship between metabolic pathways involved in processing active medicinal compounds and gene expressions of their processing enzymes.
If the candidate R gene is controlling expression of a gene which forms a rate limited step in anthocyanin production, we hypothesized that a correlation would exist between 1) R gene expression levels, 2) the appearance of color compounds, and 3) the expression of ANS and/or UF3GT genes in developing seed coats.
Figure 1 shows scatter plots of compound and protein expression similarity scores against compound structure and protein sequence similarity scores, respectively.
These primary cultured hepatocytes were then exposed (in duplo) to a compound and gene expression changes were investigated at multiple time points.
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