Sentence examples for compositional adjustments from inspiring English sources
The General Search Parameters used were as follows: parameters automatically adjusted for short queries; maximum target sequences, 100; the E threshold was 10; word size, 3. The Scoring Algorithm Parameters were: matrix, BLOSUM62; gap costs, existence, 11 extension, 1; compositional adjustments, conditional compositional score matrix adjustment.
Compositional adjustments in the design of FeB-based alloys have allowed preparation of metalloid poor Fe40Co5Ni35Zr5B15 that has γ-Fe as a primary crystallisation product for obtaining ductility of metallic glass-matrix toughened by γ-Fe crystallisation.
Therefore, we eliminated the compositional adjustments of the scoring parameters and obtained many more sequences.
Default settings of the various BLAST programs were used except for the low complexity filter and compositional adjustments.
The options were: -FF −e 0.0001 −v 2 −b 2 −m 8 −C F (no filtering, cut-off E-value = 0.0001, output and list sequences = 2, table-formatted output, no compositional adjustments).
Automated reciprocal BLASTP searches were performed [ 143] using the default parameters except that scoring parameter compositional adjustments were set to "no adjustment" and the filter parameter was set automatically to "low complexity regions".
Because of the tendency, shown in Figure 1, for TBLASTN to overstate the significance of alignments with biased composition, the use of compositional adjustment improves the reliability of the method when it is used with an E-value cutoff.
The proper content for MSW incineration ashes should not exceed 30%, except compositional adjustment using oxide constituents.
Where the three variants differ is in what type of compositional adjustment is applied.
Yu et al. performed compositional adjustment of amino acid substitution matrices for better alignment quality.
The compositional adjustment of scores attempted by PSI-BLAST (-t option set to 1) failed to satisfactorily correct for the differences.
